Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015873734.1_cds_XP_016435234.1_31216
CDS Infomation

[gene=LOC107761524] [db_xref=GeneID:107761524] [protein=protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5-like] [protein_id=XP_016435234.1] [location=complement(join(14960..15748,16311..16451,16630..16705,17249..17358,18057..18157,18258..18351))] [gbkey=CDS]
Sequence

ATGTCGAAGGAGAACGAACCGGCAAAGTTGCTACTGCCTTACCTTCAACGTGCCGATGAG
TTGCAGAAACACGAACCTCTCGTTGCCTACTACTGTCGGTTGTACGCAATGGAGCGAGGG
TTGAAGATTCCTCAAAAAGAGCGTACAAAGACCACTAGTTCCCTCCTTGTCTCCCTTATT
AATCAACTCGAAAAGGATAAGAAGTCATTGGAATTGGGGCCCGATGATCATTTGCATGTG
GAGGGATTTGCCTTGAATGTTTTTGCAAAGGCAGATAAACAAGATCGAGCTGGGAGAGCA
GACTTGAATACAGCAAAGACGTTTTATGCCGCCAGTATCTTTTTTGAGATCCTTAATCAG
TTCGGTGAACTCCAGCCTGATCTTGAGCAGAAACAGAAGTATGCAGCTTGGAAGGCAGCA
GATATAAGGAAAGCTCTGAAAGAAGGAAGGAAGCCTGTACCAGGCCCTCCTGGTGATGAA
AGAGATATTTCGGAGCTGTCCAGTGCACAAAATGATACATATGATCATCAACCTAGTGGA
ACTGATTCAGTCATCAAACCTGCACCAGAATCCGATTCAGTCATCAAACCTGCACCAGAA
TCCAGTTCATTTAATCACGCATATGACGATGCGCATTATTCTGCAAATAGACCGTCTCCT
CCAGCCACCCCACCACCACCCCCTTCACGTGTCCCTCCGTCACCTCCGGCAGCCACCACA
CCAACTCCTTCACATATCCCTCCATCACCTCCTTCATATTCTAGTGATGAGTATCCTTCT
CAAAATGACTATTCTTCTCATAATTTCCAGCAGACTGGACCAGTTAATATATCTGAAAAT
CCGTCTTACTCTCCGTCGTATCACCATCAACCTTATGTGCAAGAACCACAGTTTCACTTG
CCACAGCACTACCCTTCGCATGATGTTCCCTCGAATTCATATCCCAATTTCCAGTCATAT
CCTAGCTTTATGGAGAGCAGCCTTCCTTCTGCGCCATCACATCACCCTTCTTACTACCAA
GGCGCTGATGCTTCGTATTCCACATTGCCTGCATCTAGCACTGTAAATTATCCATCAAAC
ACTCAATACAGCTCAAGTGATAGAAATGGGACTGCATCACAAGCTGCAGCTGCTCCCACG
AAAACATATGAATACAACAGCAATTATCAGCCTCCTCCAGATAAAATAGCTGAAGCACAC
AAGGCTGCAAGGTTTGCTGTTGGGGCTCTAGCATTTGATGATGTCTCTATTGCCGTAGAC
TACCTCAAAAAATCACTTGAGTTGTTAACAAACCCATCAGGTGATCAATGA

Peptide Sequence

PEP ID

XP_016435234.1
PEP Infomation

PREDICTED: protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5-like [Nicotiana tabacum]
Sequence

MSKENEPAKLLLPYLQRADELQKHEPLVAYYCRLYAMERGLKIPQKERTKTTSSLLVSLI
NQLEKDKKSLELGPDDHLHVEGFALNVFAKADKQDRAGRADLNTAKTFYAASIFFEILNQ
FGELQPDLEQKQKYAAWKAADIRKALKEGRKPVPGPPGDERDISELSSAQNDTYDHQPSG
TDSVIKPAPESDSVIKPAPESSSFNHAYDDAHYSANRPSPPATPPPPPSRVPPSPPAATT
PTPSHIPPSPPSYSSDEYPSQNDYSSHNFQQTGPVNISENPSYSPSYHHQPYVQEPQFHL
PQHYPSHDVPSNSYPNFQSYPSFMESSLPSAPSHHPSYYQGADASYSTLPASSTVNYPSN
TQYSSSDRNGTASQAAAAPTKTYEYNSNYQPPPDKIAEAHKAARFAVGALAFDDVSIAVD
YLKKSLELLTNPSGDQ

Transcript Sequence

Gene sequence data has not been registered.